HL_7QWR_063

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

7QWR|1|5|G|4475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_063 not in the Motif Atlas

Geometric match to HL_5TBW_062

Geometric discrepancy: 0.1704

The information below is about HL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7QWR|1|5|A|4474
7QWR|1|5|G|4475
7QWR|1|5|C|4476
7QWR|1|5|A|4477
7QWR|1|5|G|4478
7QWR|1|5|A|4479
7QWR|1|5|A|4480
7QWR|1|5|U|4481

Current chains

Chain 5

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L9

Chain m

60S ribosomal protein L40