HL_7QWR_076

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CACUUG

Length

6 nucleotides

Bulged bases

7QWR|1|8|U|111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_076 not in the Motif Atlas

Homologous match to HL_5TBW_075

Geometric discrepancy: 0.3422

The information below is about HL_5TBW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

7QWR|1|8|C|107
7QWR|1|8|A|108
7QWR|1|8|C|109
7QWR|1|8|U|110
7QWR|1|8|U|111
7QWR|1|8|G|112

Current chains

Chain 8

5.8S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain j

Ribosomal protein L37

Chain l

Ribosomal protein L39