HL_7QWS_004

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCGGCG

Length

7 nucleotides

Bulged bases

7QWS|1|5|G|134, 7QWS|1|5|G|135

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_004 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.246

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7QWS|1|5|C|131
7QWS|1|5|G|132
7QWS|1|5|C|133
7QWS|1|5|G|134
7QWS|1|5|G|135
7QWS|1|5|C|136
7QWS|1|5|G|137

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain N

Ribosomal protein L15

Chain h

60S ribosomal protein L35

Chain j

Ribosomal protein L37