HL_7QWS_018

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGCUC

Length

6 nucleotides

Bulged bases

7QWS|1|5|U|1410

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_018 not in the Motif Atlas

Geometric match to HL_2B3J_003

Geometric discrepancy: 0.3023

The information below is about HL_2B3J_003

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7QWS|1|5|G|1406
7QWS|1|5|C|1407
7QWS|1|5|G|1408
7QWS|1|5|C|1409
7QWS|1|5|U|1410
7QWS|1|5|C|1411

Current chains

Chain 5

28S rRNA

Nearby chains

Chain b

60S ribosomal protein L29