HL_7QWS_020

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

7QWS|1|5|C|1481, 7QWS|1|5|C|1485

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_020 not in the Motif Atlas

Geometric match to HL_6VMY_004

Geometric discrepancy: 0.2996

The information below is about HL_6VMY_004

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

7QWS|1|5|G|1479
7QWS|1|5|C|1480
7QWS|1|5|C|1481
7QWS|1|5|G|1482
7QWS|1|5|C|1483
7QWS|1|5|G|1484
7QWS|1|5|C|1485
7QWS|1|5|C|1486

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

Ribosomal protein L13

Chain i

60S ribosomal protein L36