HL_7QWS_032
3D structure
- PDB id
- 7QWS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- ACGAGAACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QWS_032 not in the Motif Atlas
- Geometric match to HL_4FRN_005
- Geometric discrepancy: 0.2294
- The information below is about HL_4FRN_005
- Detailed Annotation
- T-loop with 2 bulged bases not stacked
- Broad Annotation
- T-loop
- Motif group
- HL_01609.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
7QWS|1|5|A|2376
7QWS|1|5|C|2377
7QWS|1|5|G|2378
7QWS|1|5|A|2379
7QWS|1|5|G|2380
7QWS|1|5|A|2381
7QWS|1|5|A|2382
7QWS|1|5|C|2383
7QWS|1|5|U|2384
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain P
- 60S ribosomal protein L17
- Chain R
- 60S ribosomal protein L19
- Chain d
- Ribosomal protein L31
- Chain t
- Nascent polypeptide-associated complex subunit alpha
- Chain u
- Transcription factor BTF3
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