HL_7QWS_052

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7QWS|1|5|A|3876, 7QWS|1|5|A|3877, 7QWS|1|5|C|3878

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_052 not in the Motif Atlas

Geometric match to HL_5TBW_051

Geometric discrepancy: 0.1335

The information below is about HL_5TBW_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7QWS|1|5|G|3873
7QWS|1|5|G|3874
7QWS|1|5|G|3875
7QWS|1|5|A|3876
7QWS|1|5|A|3877
7QWS|1|5|C|3878
7QWS|1|5|G|3879
7QWS|1|5|G|3880
7QWS|1|5|G|3881
7QWS|1|5|C|3882

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain e

Ribosomal protein L32