HL_7QWS_055

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7QWS|1|5|G|4195

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_055 not in the Motif Atlas

Geometric match to HL_4V9F_055

Geometric discrepancy: 0.1616

The information below is about HL_4V9F_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7QWS|1|5|C|4193
7QWS|1|5|U|4194
7QWS|1|5|G|4195
7QWS|1|5|G|4196
7QWS|1|5|G|4197
7QWS|1|5|G|4198
7QWS|1|5|C|4199
7QWS|1|5|G|4200
7QWS|1|5|G|4201

Current chains

Chain 5

28S rRNA

Nearby chains

Chain I

60S ribosomal protein L10

Chain b

60S ribosomal protein L29