HL_7QWS_063

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

7QWS|1|5|G|4475

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_063 not in the Motif Atlas

Geometric match to HL_5TBW_062

Geometric discrepancy: 0.1405

The information below is about HL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7QWS|1|5|A|4474
7QWS|1|5|G|4475
7QWS|1|5|C|4476
7QWS|1|5|A|4477
7QWS|1|5|G|4478
7QWS|1|5|A|4479
7QWS|1|5|A|4480
7QWS|1|5|U|4481

Current chains

Chain 5

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L9

Chain m

Ribosomal protein L40