HL_7QWS_068

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

7QWS|1|5|C|4698

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_068 not in the Motif Atlas

Geometric match to HL_5J7L_199

Geometric discrepancy: 0.127

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7QWS|1|5|C|4688
7QWS|1|5|U|4689
7QWS|1|5|G|4690
7QWS|1|5|A|4691
7QWS|1|5|A|4692
7QWS|1|5|C|4693
7QWS|1|5|G|4694
7QWS|1|5|C|4695
7QWS|1|5|C|4696
7QWS|1|5|U|4697
7QWS|1|5|C|4698
7QWS|1|5|U|4699
7QWS|1|5|A|4700
7QWS|1|5|A|4701
7QWS|1|5|G|4702

Current chains

Chain 5

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L9

Chain O

Ribosomal protein L13a

Chain m

Ribosomal protein L40