HL_7QWS_071

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

7QWS|1|5|U|5026, 7QWS|1|5|C|5027

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_071 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3695

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7QWS|1|5|C|5021
7QWS|1|5|U|5022
7QWS|1|5|C|5023
7QWS|1|5|C|5024
7QWS|1|5|C|5025
7QWS|1|5|U|5026
7QWS|1|5|C|5027
7QWS|1|5|G|5028

Current chains

Chain 5

28S rRNA

Nearby chains

Chain U

Ribosomal protein L22