HL_7RR5_052
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 7RR5|1|C1|A|2256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_052 not in the Motif Atlas
- Homologous match to HL_8C3A_049
- Geometric discrepancy: 0.1404
- The information below is about HL_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7RR5|1|C1|G|2253
7RR5|1|C1|U|2254
7RR5|1|C1|A|2255
7RR5|1|C1|A|2256
7RR5|1|C1|C|2257
7RR5|1|C1|U|2258
7RR5|1|C1|A|2259
7RR5|1|C1|U|2260
7RR5|1|C1|G|2261
7RR5|1|C1|A|2262
7RR5|1|C1|C|2263
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain C2
- Small subunit ribosomal RNA; SSU rRNA
- Chain P
- Transfer RNA; tRNA
- Chain R
- Ribosome-interacting GTPase 1
- Chain Se
- 40S ribosomal protein S30
- Chain m
- mRNA
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