HL_7RR5_105

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7RR5|1|C2|U|1314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_105 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.1076

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7RR5|1|C2|C|1309
7RR5|1|C2|U|1310
7RR5|1|C2|U|1311
7RR5|1|C2|A|1312
7RR5|1|C2|A|1313
7RR5|1|C2|U|1314
7RR5|1|C2|U|1315
7RR5|1|C2|G|1316

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S17-A