HL_7RYF_039

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGAGUAG

Length

7 nucleotides

Bulged bases

7RYF|1|A|U|1632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYF_039 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1035

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7RYF|1|A|C|1628
7RYF|1|A|G|1629
7RYF|1|A|A|1630
7RYF|1|A|G|1631
7RYF|1|A|U|1632
7RYF|1|A|A|1633
7RYF|1|A|G|1634

Current chains

Chain A

23S ribosomal RNA

Nearby chains