3D structure

PDB id
7RYG (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.38 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
7RYG|1|a|U|790
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RYG_084 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.1674
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

7RYG|1|a|G|783
7RYG|1|a|A|784
7RYG|1|a|U|785
7RYG|1|a|U|786
7RYG|1|a|A|787
7RYG|1|a|G|788
7RYG|1|a|A|789
7RYG|1|a|U|790
7RYG|1|a|A|791
7RYG|1|a|C|792
7RYG|1|a|C|793

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain k
30S ribosomal protein S11
Chain v
Transfer RNA; tRNA
Chain w
mRNA

Coloring options:


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