HL_7RYG_103

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GGGUAACACU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYG_103 not in the Motif Atlas

Geometric match to HL_5TBW_015

Geometric discrepancy: 0.3247

The information below is about HL_5TBW_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53971.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7RYG|1|A|G|709
7RYG|1|A|G|710
7RYG|1|A|G|711
7RYG|1|A|U|712
7RYG|1|A|A|713
7RYG|1|A|A|714
7RYG|1|A|C|715
7RYG|1|A|A|716
7RYG|1|A|C|717
7RYG|1|A|U|718

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain o

30S ribosomal protein S15