HL_7RYH_012

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GCACGUGAAAC

Length

11 nucleotides

Bulged bases

7RYH|1|A|G|385, 7RYH|1|A|A|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1383

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7RYH|1|A|G|381
7RYH|1|A|C|382
7RYH|1|A|A|383
7RYH|1|A|C|384
7RYH|1|A|G|385
7RYH|1|A|U|386
7RYH|1|A|G|387
7RYH|1|A|A|388
7RYH|1|A|A|389
7RYH|1|A|A|390
7RYH|1|A|C|391

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28