3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
7RYH|1|A|G|2747, 7RYH|1|A|C|2751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RYH_062 not in the Motif Atlas
Homologous match to HL_7RQB_066
Geometric discrepancy: 0.1222
The information below is about HL_7RQB_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_56677.7
Basepair signature
cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
8

Unit IDs

7RYH|1|A|C|2741
7RYH|1|A|U|2742
7RYH|1|A|G|2743
7RYH|1|A|A|2744
7RYH|1|A|A|2745
7RYH|1|A|A|2746
7RYH|1|A|G|2747
7RYH|1|A|C|2748
7RYH|1|A|A|2749
7RYH|1|A|U|2750
7RYH|1|A|C|2751
7RYH|1|A|U|2752
7RYH|1|A|A|2753
7RYH|1|A|A|2754
7RYH|1|A|G|2755

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain I
50S ribosomal protein L13

Coloring options:


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