HL_7RYH_082

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYH_082 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.1685

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7RYH|1|a|C|686
7RYH|1|a|G|687
7RYH|1|a|G|688
7RYH|1|a|U|689
7RYH|1|a|G|690
7RYH|1|a|A|691
7RYH|1|a|A|692
7RYH|1|a|A|693
7RYH|1|a|U|694
7RYH|1|a|G|695

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11

Chain u

30S ribosomal protein S21