HL_7S0S_013

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUGAGAGCC

Length

9 nucleotides

Bulged bases

7S0S|1|C|G|411, 7S0S|1|C|A|412, 7S0S|1|C|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_013 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.1

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

7S0S|1|C|G|409
7S0S|1|C|U|410
7S0S|1|C|G|411
7S0S|1|C|A|412
7S0S|1|C|G|413
7S0S|1|C|A|414
7S0S|1|C|G|415
7S0S|1|C|C|416
7S0S|1|C|C|417

Current chains

Chain C

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L4

Chain W

50S ribosomal protein L24