HL_7S0S_014

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GGCCCGUGGAAUC

Length

13 nucleotides

Bulged bases

7S0S|1|C|G|474

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_014 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.2182

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7S0S|1|C|G|469
7S0S|1|C|G|470
7S0S|1|C|C|471
7S0S|1|C|C|472
7S0S|1|C|C|473
7S0S|1|C|G|474
7S0S|1|C|U|475
7S0S|1|C|G|476
7S0S|1|C|G|477
7S0S|1|C|A|478
7S0S|1|C|A|479
7S0S|1|C|U|480
7S0S|1|C|C|481

Current chains

Chain C

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28