HL_7S0S_032

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_032 not in the Motif Atlas

Homologous match to HL_7A0S_029

Geometric discrepancy: 0.4185

The information below is about HL_7A0S_029

Detailed Annotation

GNRA related

Broad Annotation

T-loop

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7S0S|1|C|C|1210
7S0S|1|C|G|1211
7S0S|1|C|U|1212
7S0S|1|C|A|1213
7S0S|1|C|A|1214
7S0S|1|C|U|1215
7S0S|1|C|A|1216
7S0S|1|C|G|1217

Current chains

Chain C

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L6

Chain K

50S ribosomal protein L11

Chain g

50S ribosomal protein L36