HL_7S0S_063

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UGAGUGGAAG

Length

10 nucleotides

Bulged bases

7S0S|1|C|A|2630

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_063 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0687

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7S0S|1|C|U|2628
7S0S|1|C|G|2629
7S0S|1|C|A|2630
7S0S|1|C|G|2631
7S0S|1|C|U|2632
7S0S|1|C|G|2633
7S0S|1|C|G|2634
7S0S|1|C|A|2635
7S0S|1|C|A|2636
7S0S|1|C|G|2637

Current chains

Chain C

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L15