HL_7S1H_106

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

ACUACGGU

Length

8 nucleotides

Bulged bases

7S1H|1|I|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_106 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.3645

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7S1H|1|I|A|1532
7S1H|1|I|C|1533
7S1H|1|I|U|1534
7S1H|1|I|A|1535
7S1H|1|I|C|1536
7S1H|1|I|G|1537
7S1H|1|I|G|1538
7S1H|1|I|U|1539

Current chains

Chain I

23S rRNA

Nearby chains