HL_7S1I_057
3D structure
- PDB id
- 7S1I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli stalled ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- U(1MG)(PSU)(5MU)GAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 7S1I|1|I|A|751, 7S1I|1|I|A|752
- QA status
- Modified nucleotides: 1MG, PSU, 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7S1I_057 not in the Motif Atlas
- Homologous match to HL_5J7L_155
- Geometric discrepancy: 0.0812
- The information below is about HL_5J7L_155
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7S1I|1|I|U|744
7S1I|1|I|1MG|745
7S1I|1|I|PSU|746
7S1I|1|I|5MU|747
7S1I|1|I|G|748
7S1I|1|I|A|749
7S1I|1|I|A|750
7S1I|1|I|A|751
7S1I|1|I|A|752
7S1I|1|I|A|753
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
- Chain k
- 50S ribosomal protein L34
Coloring options: