HL_7S9U_041

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

7S9U|1|A|A|1679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_041 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1939

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7S9U|1|A|A|1675
7S9U|1|A|G|1676
7S9U|1|A|A|1677
7S9U|1|A|G|1678
7S9U|1|A|A|1679
7S9U|1|A|A|1680
7S9U|1|A|U|1681

Current chains

Chain A

RNA (2436-MER)

Nearby chains