HL_7S9U_060

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7S9U|1|A|G|2780, 7S9U|1|A|C|2784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_060 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.5725

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

7S9U|1|A|C|2774
7S9U|1|A|U|2775
7S9U|1|A|G|2776
7S9U|1|A|A|2777
7S9U|1|A|A|2778
7S9U|1|A|A|2779
7S9U|1|A|G|2780
7S9U|1|A|C|2781
7S9U|1|A|A|2782
7S9U|1|A|U|2783
7S9U|1|A|C|2784
7S9U|1|A|U|2785
7S9U|1|A|A|2786
7S9U|1|A|A|2787
7S9U|1|A|G|2788

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain J

50S ribosomal protein L13