HL_7SA4_067

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CCUUUAAGG

Length

9 nucleotides

Bulged bases

7SA4|1|1|U|2797, 7SA4|1|1|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SA4_067 not in the Motif Atlas

Geometric match to HL_5TBW_015

Geometric discrepancy: 0.3836

The information below is about HL_5TBW_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53971.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7SA4|1|1|C|2794
7SA4|1|1|C|2795
7SA4|1|1|U|2796
7SA4|1|1|U|2797
7SA4|1|1|U|2798
7SA4|1|1|A|2799
7SA4|1|1|A|2800
7SA4|1|1|G|2801
7SA4|1|1|G|2802

Current chains

Chain 1

23S ribosomal RNA

Nearby chains