HL_7SFR_018

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUUUGAAGAA

Length

10 nucleotides

Bulged bases

7SFR|1|A|A|676

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_018 not in the Motif Atlas

Geometric match to HL_7RQB_018

Geometric discrepancy: 0.1061

The information below is about HL_7RQB_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

7SFR|1|A|U|668
7SFR|1|A|U|669
7SFR|1|A|U|670
7SFR|1|A|U|671
7SFR|1|A|G|672
7SFR|1|A|A|673
7SFR|1|A|A|674
7SFR|1|A|G|675
7SFR|1|A|A|676
7SFR|1|A|A|677

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain L

50S ribosomal protein L15

Chain R

50S ribosomal protein L21