HL_7SSW_059

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSW_059 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.2194

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7SSW|1|1|A|2471
7SSW|1|1|G|2472
7SSW|1|1|U|2473
7SSW|1|1|U|2474
7SSW|1|1|C|2475
7SSW|1|1|A|2476
7SSW|1|1|U|2477
7SSW|1|1|A|2478
7SSW|1|1|U|2479

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6