HL_7ST6_103
3D structure
- PDB id
- 7ST6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation, non-rotated 70S ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGCUUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7ST6|1|5|C|16, 7ST6|1|5|G|18, 7ST6|1|5|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST6_103 not in the Motif Atlas
- Geometric match to HL_1N78_001
- Geometric discrepancy: 0.3958
- The information below is about HL_1N78_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78347.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7ST6|1|5|C|13
7ST6|1|5|A|14
7ST6|1|5|G|15
7ST6|1|5|C|16
7ST6|1|5|U|17
7ST6|1|5|U|17|||A
7ST6|1|5|G|18
7ST6|1|5|G|19
7ST6|1|5|U|20
7ST6|1|5|A|21
7ST6|1|5|G|22
Current chains
- Chain 5
- tRNA Pro
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 6
- Transfer RNA; tRNA
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