HL_7SUK_002

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

7SUK|1|8|U|194

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SUK_002 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3378

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7SUK|1|8|C|190
7SUK|1|8|C|191
7SUK|1|8|U|192
7SUK|1|8|U|193
7SUK|1|8|U|194
7SUK|1|8|G|195

Current chains

Chain 8

18S pre-rRNA

Nearby chains