HL_7SUK_017
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- UGAAACUUAAA
- Length
- 11 nucleotides
- Bulged bases
- 7SUK|1|8|A|1131, 7SUK|1|8|U|1135
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SUK_017 not in the Motif Atlas
- Geometric match to HL_3IGI_004
- Geometric discrepancy: 0.3153
- The information below is about HL_3IGI_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37569.3
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7SUK|1|8|U|1129
7SUK|1|8|G|1130
7SUK|1|8|A|1131
7SUK|1|8|A|1132
7SUK|1|8|A|1133
7SUK|1|8|C|1134
7SUK|1|8|U|1135
7SUK|1|8|U|1136
7SUK|1|8|A|1137
7SUK|1|8|A|1138
7SUK|1|8|A|1139
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain LQ
- U3 small nucleolar RNA-associated protein 12
- Chain NE
- Protein FAF1
- Chain SH
- RNA 3'-terminal phosphate cyclase-like protein
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