HL_7SUK_027

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CGUCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SUK_027 not in the Motif Atlas

Geometric match to HL_2CZJ_007

Geometric discrepancy: 0.2454

The information below is about HL_2CZJ_007

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

7SUK|1|L0|C|120
7SUK|1|L0|G|121
7SUK|1|L0|U|122
7SUK|1|L0|C|123
7SUK|1|L0|A|124
7SUK|1|L0|G|125

Current chains

Chain L0

5' ETS

Nearby chains

Chain SU

Nucleolar complex protein 4