HL_7TOQ_007

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

7TOQ|1|A18S|G|385

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A18S|G|377
7TOQ|1|A18S|U|378
7TOQ|1|A18S|C|379
7TOQ|1|A18S|G|380
7TOQ|1|A18S|C|381
7TOQ|1|A18S|C|382
7TOQ|1|A18S|G|383
7TOQ|1|A18S|U|384
7TOQ|1|A18S|G|385
7TOQ|1|A18S|C|386
7TOQ|1|A18S|C|387

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS08

40S ribosomal protein S8

Chain AS11

40S ribosomal protein S11