HL_7TOR_078
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 7TOR|1|A28S|C|2794, 7TOR|1|A28S|G|2796, 7TOR|1|A28S|A|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_078 not in the Motif Atlas
- Homologous match to HL_8C3A_041
- Geometric discrepancy: 0.0897
- The information below is about HL_8C3A_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56817.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7TOR|1|A28S|C|2792
7TOR|1|A28S|G|2793
7TOR|1|A28S|C|2794
7TOR|1|A28S|A|2795
7TOR|1|A28S|G|2796
7TOR|1|A28S|C|2797
7TOR|1|A28S|A|2798
7TOR|1|A28S|G|2799
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL04
- 60S ribosomal protein L4
- Chain AL17
- 60S ribosomal protein L17
- Chain AL37
- 60S ribosomal protein L37
- Chain AL39
- 60S ribosomal protein L39
- Chain GR1
- GR20, ALS/FTD dipeptide repeat protein
Coloring options: