HL_7TOS_053
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUCGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 7TOS|1|23S|C|747, 7TOS|1|23S|A|751, 7TOS|1|23S|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_053 not in the Motif Atlas
- Geometric match to HL_4WF9_023
- Geometric discrepancy: 0.1374
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7TOS|1|23S|U|744
7TOS|1|23S|G|745
7TOS|1|23S|U|746
7TOS|1|23S|C|747
7TOS|1|23S|G|748
7TOS|1|23S|A|749
7TOS|1|23S|A|750
7TOS|1|23S|A|751
7TOS|1|23S|A|752
7TOS|1|23S|A|753
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L03
- 50S ribosomal protein L3
- Chain L22
- 50S ribosomal protein L22
- Chain L32
- 50S ribosomal protein L32
- Chain L34
- 50S ribosomal protein L34
- Chain PR
- PR20, ALS/FTD dipeptide repeat protein
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