HL_7TOS_076
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7TOS|1|23S|A|1780, 7TOS|1|23S|U|1781, 7TOS|1|23S|U|1782, 7TOS|1|23S|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_076 not in the Motif Atlas
- Geometric match to HL_4WF9_043
- Geometric discrepancy: 0.1254
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7TOS|1|23S|U|1777
7TOS|1|23S|U|1778
7TOS|1|23S|U|1779
7TOS|1|23S|A|1780
7TOS|1|23S|U|1781
7TOS|1|23S|U|1782
7TOS|1|23S|A|1783
7TOS|1|23S|A|1784
7TOS|1|23S|A|1785
7TOS|1|23S|A|1786
7TOS|1|23S|A|1787
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L02
- 50S ribosomal protein L2
- Chain L34
- 50S ribosomal protein L34
- Chain PR
- PR20, ALS/FTD dipeptide repeat protein
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