HL_7TOS_079
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 7TOS|1|23S|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_079 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.3951
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7TOS|1|23S|G|1910
7TOS|1|23S|U|1911
7TOS|1|23S|A|1912
7TOS|1|23S|A|1913
7TOS|1|23S|C|1914
7TOS|1|23S|U|1915
7TOS|1|23S|A|1916
7TOS|1|23S|U|1917
7TOS|1|23S|A|1918
7TOS|1|23S|A|1919
7TOS|1|23S|C|1920
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain 16S
- Small subunit ribosomal RNA; SSU rRNA
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