HL_7TOS_086
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUCGGACAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_086 not in the Motif Atlas
- Geometric match to HL_5J7L_188
- Geometric discrepancy: 0.1685
- The information below is about HL_5J7L_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11805.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7TOS|1|23S|G|2303
7TOS|1|23S|G|2304
7TOS|1|23S|U|2305
7TOS|1|23S|C|2306
7TOS|1|23S|G|2307
7TOS|1|23S|G|2308
7TOS|1|23S|A|2309
7TOS|1|23S|C|2310
7TOS|1|23S|A|2311
7TOS|1|23S|U|2312
7TOS|1|23S|C|2313
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L05
- 50S ribosomal protein L5
Coloring options: