HL_7TTU_076

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCACGUGAAAU

Length

11 nucleotides

Bulged bases

7TTU|1|1|G|432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_076 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2014

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7TTU|1|1|G|428
7TTU|1|1|C|429
7TTU|1|1|A|430
7TTU|1|1|C|431
7TTU|1|1|G|432
7TTU|1|1|U|433
7TTU|1|1|G|434
7TTU|1|1|A|435
7TTU|1|1|A|436
7TTU|1|1|A|437
7TTU|1|1|U|438

Current chains

Chain 1

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L28