HL_7TTW_009

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

7TTW|1|1|A|354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTW_009 not in the Motif Atlas

Geometric match to HL_7A0S_010

Geometric discrepancy: 0.1198

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

21

Unit IDs

7TTW|1|1|C|348
7TTW|1|1|U|349
7TTW|1|1|G|350
7TTW|1|1|G|351
7TTW|1|1|A|352
7TTW|1|1|A|353
7TTW|1|1|A|354
7TTW|1|1|G|355

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L24