HL_7TUT_024
3D structure
- PDB id
- 7TUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- ACGUGCGAAU
- Length
- 10 nucleotides
- Bulged bases
- 7TUT|1|K|U|1596, 7TUT|1|K|A|1600, 7TUT|1|K|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TUT_024 not in the Motif Atlas
- Homologous match to HL_8C3A_020
- Geometric discrepancy: 0.1339
- The information below is about HL_8C3A_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7TUT|1|K|A|1593
7TUT|1|K|C|1594
7TUT|1|K|G|1595
7TUT|1|K|U|1596
7TUT|1|K|G|1597
7TUT|1|K|C|1598
7TUT|1|K|G|1599
7TUT|1|K|A|1600
7TUT|1|K|A|1601
7TUT|1|K|U|1602
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain B
- Nascent chain
- Chain P
- uL22
- Chain j
- Ribosomal protein L37
- Chain w
- uL3
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