3D structure

PDB id
7TZS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)
Experimental method
X-RAY DIFFRACTION
Resolution
2.21 Å

Loop

Sequence
CUGCGUG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64188.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
18

Unit IDs

7TZS|1|X|C|27
7TZS|1|X|U|28
7TZS|1|X|G|29
7TZS|1|X|C|30
7TZS|1|X|G|31
7TZS|1|X|U|32
7TZS|1|X|G|33

Current chains

Chain X
RNA (80-MER)

Nearby chains

Chain Y
TPP riboswitch (THI element)

Coloring options:

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