7TZS Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7TZS_001 | 1/X/27:33 | No text annotation HL_31585.3 | ||
| HL_7TZS_002 | 1/X/66:73 | T-loop related HL_77436.5 | ||
| HL_7TZS_003 | 1/Y/27:33 | No text annotation | homologous HL_7TZS_001 HL_31585.3 | |
| HL_7TZS_004 | 1/Y/66:73 | T-loop related | homologous HL_7TZS_002 HL_77436.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7TZS_001 | 1/X/18:20, 1/X/45:48 | No text annotation IL_14688.1 | ||
| IL_7TZS_009 | 1/X/18:21, 1/X/38:48 | No text annotation IL_44624.1 | ||
| IL_7TZS_002 | 1/X/20:21, 1/X/38:45 | Stack outside cWW IL_38394.1 | ||
| IL_7TZS_003 | 1/X/23:25, 1/X/35:36 | Minor groove platform related IL_51454.2 | ||
| IL_7TZS_010 | 1/Y/18:21, 1/Y/38:48 | No text annotation | ||
| IL_7TZS_006 | 1/Y/20:21, 1/Y/38:45 | Stack outside cWW | homologous IL_7TZS_002 IL_38394.1 | |
| IL_7TZS_007 | 1/Y/23:25, 1/Y/35:36 | Minor groove platform related | homologous IL_7TZS_003 IL_51454.2 | |
| IL_7TZS_008 | 1/Y/59:63, 1/Y/76:80 | No text annotation | homologous IL_7TZS_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7TZS_004 | No text annotation | ||
| IL_7TZS_005 | Isolated non-canonical cWW pair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_7TZS_002 | 1/Y/14:15, 1/Y/51:57, 1/Y/82:85 | No text annotation | homologous J3_7TZS_001 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_7TZS_001 | No text annotation |
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