HL_7U0H_046
3D structure
- PDB id
- 7U0H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7U0H|1|1|A|2138, 7U0H|1|1|A|2139, 7U0H|1|1|U|2140, 7U0H|1|1|U|2141, 7U0H|1|1|A|2142, 7U0H|1|1|A|2144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7U0H_046 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.3952
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7U0H|1|1|U|2135
7U0H|1|1|C|2136
7U0H|1|1|U|2137
7U0H|1|1|A|2138
7U0H|1|1|A|2139
7U0H|1|1|U|2140
7U0H|1|1|U|2141
7U0H|1|1|A|2142
7U0H|1|1|A|2143
7U0H|1|1|A|2144
7U0H|1|1|A|2145
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain j
- 60S ribosomal protein L37-A
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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