HL_7U2B_002

3D structure

PDB id

7U2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(GCU-TL)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UCUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7U2B_002 not in the Motif Atlas

Geometric match to HL_4V9F_032

Geometric discrepancy: 0.2991

The information below is about HL_4V9F_032

Detailed Annotation

Anticodon loop related

Broad Annotation

Anticodon loop related

Motif group

HL_87306.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7U2B|1|C|U|39
7U2B|1|C|C|40
7U2B|1|C|U|41
7U2B|1|C|A|42
7U2B|1|C|A|43
7U2B|1|C|C|44
7U2B|1|C|A|45
7U2B|1|C|A|46

Current chains

Chain C

RNA (53-MER)

Nearby chains

Chain B

Serine--tRNA ligase, mitochondrial