HL_7UCK_102
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7UCK|1|9|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UCK_102 not in the Motif Atlas
- Geometric match to HL_5J7L_017
- Geometric discrepancy: 0.0939
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7UCK|1|9|G|1054
7UCK|1|9|A|1055
7UCK|1|9|U|1056
7UCK|1|9|C|1057
7UCK|1|9|A|1058
7UCK|1|9|G|1059
7UCK|1|9|A|1060
7UCK|1|9|U|1061
7UCK|1|9|A|1062
7UCK|1|9|C|1063
7UCK|1|9|C|1064
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 1
- mRNA
- Chain 2
- Transfer RNA; tRNA
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain OO
- 40S ribosomal protein S14
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