HL_7UG7_043

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7UG7|1|23|G|386, 7UG7|1|23|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_043 not in the Motif Atlas

Geometric match to HL_5J7L_145

Geometric discrepancy: 0.0625

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UG7|1|23|A|382
7UG7|1|23|C|383
7UG7|1|23|A|384
7UG7|1|23|C|385
7UG7|1|23|G|386
7UG7|1|23|U|387
7UG7|1|23|G|388
7UG7|1|23|G|389
7UG7|1|23|U|390
7UG7|1|23|A|391
7UG7|1|23|U|392

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain Lb

50S ribosomal protein L28