3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
AGAGAAU
Length
7 nucleotides
Bulged bases
7UG7|1|23|A|1634
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UG7_072 not in the Motif Atlas
Geometric match to HL_5J7L_174
Geometric discrepancy: 0.0582
The information below is about HL_5J7L_174
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7UG7|1|23|A|1630
7UG7|1|23|G|1631
7UG7|1|23|A|1632
7UG7|1|23|G|1633
7UG7|1|23|A|1634
7UG7|1|23|A|1635
7UG7|1|23|U|1636

Current chains

Chain 23
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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